Mercurial > repos > iuc > bedtools

diff bamToFastq.xml @ 26:c0fbce5dc84a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:20 -0400
parents 5efc48568d8d
children cb98f29aa1dc
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--- a/bamToFastq.xml	Wed Sep 14 17:29:56 2016 -0400
+++ b/bamToFastq.xml	Mon Oct 17 10:13:20 2016 -0400
@@ -16,8 +16,8 @@
     </command>
     <inputs>
         <param format="bam" name="input" type="data" label="Convert the following BAM file to FASTQ"/>
-        <param name="tags" type="boolean" truevalue="-tags" falsevalue="" selected="False" label="Create FASTQ based on the mate info in the BAM R2 and Q2 tags."/>
-        <param name="fq2" type="boolean" truevalue="-fq2" falsevalue="" selected="False" label="FASTQ for second end.
+        <param name="tags" type="boolean" truevalue="-tags" falsevalue="" checked="False" label="Create FASTQ based on the mate info in the BAM R2 and Q2 tags."/>
+        <param name="fq2" type="boolean" truevalue="-fq2" falsevalue="" checked="False" label="FASTQ for second end.
             Used if BAM contains paired-end data. BAM should be sorted by query name if creating paired FASTQ with this option."/>
     </inputs>
     <outputs>