comparison bedToBam.xml @ 17:a2d4c30ba2f9 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 0887009a23d176b21536c9fd8a18c4fecc417d4f

16:e30113df8cf6

<tool id="bedtools_bedtobam" name="Convert from BED to BAM" version="@WRAPPER_VERSION@.0">
    <description></description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />
    <expand macro="stdio" />

    </outputs>
    <tests>
        <test>
            <param name="input" value="bedToBam1.bed" ftype="bed" />
            <param name="genome" value="mm9_chr1.len" ftype="tabular" />
            <output name="output" file="bedToBam_result.bam" lines_diff="2" ftype="bam" />
        </test>
    </tests>
    <help>
<![CDATA[
**What it does**

17:a2d4c30ba2f9

<tool id="bedtools_bedtobam" name="BED to BAM" version="@WRAPPER_VERSION@.0">
    <description>converter</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />
    <expand macro="stdio" />

    </outputs>
    <tests>
        <test>
            <param name="input" value="bedToBam1.bed" ftype="bed" />
            <param name="genome" value="mm9_chr1.len" ftype="tabular" />
            <output name="output" file="bedToBam_result.bam" lines_diff="4" ftype="bam" />
        </test>
    </tests>
    <help>
<![CDATA[
**What it does**