# HG changeset patch
# User iuc
# Date 1513104391 18000
# Node ID 2319d958cee58d5773ec88a87f4ac2896304917a
# Parent  eb540984663ab499b3aba5bf84fde285aa71cc51
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 880627162bdeb854582e9f58ddab451de35feba3

diff -r eb540984663a -r 2319d958cee5 macros.xml
--- a/macros.xml	Thu Apr 13 17:37:10 2017 -0400
+++ b/macros.xml	Tue Dec 12 13:46:31 2017 -0500
@@ -49,7 +49,7 @@
   bgzip -c '$input_file' > $input_vcf &&
   bcftools index $input_vcf &&
 #elif $input_file.is_of_type('vcf_bgzip')
-  ln -s '$input_file' $input_vcf
+  ln -s '$input_file' $input_vcf &&
 #elif $input_file.is_of_type('bcf')
   #set $input_vcf = 'input.bcf'
   ln -s '$input_file' $input_vcf &&
@@ -59,7 +59,7 @@
     bcftools index $input_vcf &&
   #end if
 #elif $input_file.is_of_type('bcf_bgzip')
-  ln -s '$input_file' $input_vcf
+  ln -s '$input_file' $input_vcf &&
 #end if
 ]]>
   </token>