comparison bcftools_convert_from_vcf.xml @ 9:d9e4bcdd052f draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5

8:6c6b5c192e0c

<?xml version='1.0' encoding='utf-8'?>
<tool name="bcftools @EXECUTABLE@ from vcf" id="bcftools_@EXECUTABLE@_from_vcf" version="@TOOL_VERSION@">
    <description>Converts VCF/BCF to IMPUTE2/SHAPEIT formats</description>
    <macros>
        <token name="@EXECUTABLE@">convert</token>
        <import>macros.xml</import>
        <xml name="macro_vcf_ids">

#end if]]></configfile>
    </configfiles>
    <inputs>
        <expand macro="macro_input" />
        <section name="sec_restrict" expanded="false" title="Restrict to">
            <expand macro="macro_regions" />
            <expand macro="macro_targets" />
            <expand macro="macro_samples" />
            <expand macro="macro_include" />
            <expand macro="macro_exclude" />
        </section>
        <conditional name="convert">

9:d9e4bcdd052f

<?xml version='1.0' encoding='utf-8'?>
<tool name="bcftools @EXECUTABLE@ from vcf" id="bcftools_@EXECUTABLE@_from_vcf" version="@TOOL_VERSION@+galaxy1">
    <description>Converts VCF/BCF to IMPUTE2/SHAPEIT formats</description>
    <macros>
        <token name="@EXECUTABLE@">convert</token>
        <import>macros.xml</import>
        <xml name="macro_vcf_ids">

#end if]]></configfile>
    </configfiles>
    <inputs>
        <expand macro="macro_input" />
        <section name="sec_restrict" expanded="false" title="Restrict to">
            <expand macro="macro_restrict" />
            <expand macro="macro_restrict" type="target" label_type="Target" />
            <expand macro="macro_samples" />
            <expand macro="macro_include" />
            <expand macro="macro_exclude" />
        </section>
        <conditional name="convert">