Mercurial > repos > iracooke > protk_proteowizard

view tool_dependencies.xml @ 1:38df4afce868 default tip

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Fix
author Ira Cooke <iracooke@gmail.com>
date Thu, 06 Jun 2013 15:35:37 +1000
parents a79637d3e308
children
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<?xml version="1.0"?>
<tool_dependency>
    <package name="galaxy_protk" version="1.2.2">
         <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="galaxy_protk" owner="iracooke" changeset_revision="32c643142290" prior_installation_required="True"/>
    </package>
    <package name="proteowizard" version="3_0_4388">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
                <action type="shell_command">sh install_pwiz.sh $INSTALL_DIR 1.2.2</action>
                <action type="move_file">
                    <source>install_pwiz.sh</source>
                    <destination>$INSTALL_DIR</destination>
                </action>
                <action type="set_environment">
                    <environment_variable name="PROTK_PWIZ_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            Installs Proteowizard via the protk installer
        </readme>
    </package>

</tool_dependency>