# HG changeset patch
# User iracooke
# Date 1433354314 14400
# Node ID dd1e1469833f6df7ae58d9f6999411cbbeb91241

planemo upload commit baef2b4b6868ef960d88bf09ee1afb7a1b9224be

diff -r 000000000000 -r dd1e1469833f tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Jun 03 13:58:34 2015 -0400
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="peptide_shaker" version="0.39">
+    <install version="1.0">
+        <actions>
+            <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/0.39.1/PeptideShaker-0.39.1.zip</action>
+            <action type="move_directory_files">
+                <source_directory>.</source_directory>
+                <destination_directory>$INSTALL_DIR/</destination_directory>
+            </action>
+            <action type="set_environment">
+                <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-0.39.1.jar</environment_variable>
+            </action>
+        </actions>
+    </install>
+    <readme>
+        Install Galaxy package application for PeptideShaker 0.39
+        http://peptide-shaker.googlecode.com 
+    </readme>
+  </package>
+</tool_dependency>