Mercurial > repos > iracooke > omssa
changeset 6:42b0c5c270f9
Dependency tweaks
| author | Ira Cooke <iracooke@gmail.com> |
|---|---|
| date | Mon, 28 Oct 2013 13:13:59 +1100 |
| parents | 3aafd0a91830 |
| children | 73b6e24a944c |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 17 insertions(+), 7 deletions(-) [+] |
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--- a/tool_dependencies.xml Fri Oct 25 15:19:29 2013 +1100 +++ b/tool_dependencies.xml Mon Oct 28 13:13:59 2013 +1100 @@ -1,15 +1,25 @@ <?xml version="1.0"?> <tool_dependency> - <package name="omssa" version="2.1.9"> - <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/> - </package> - - <package name="protk" version="1.2.4"> - <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_4" owner="bgruening" changeset_revision="e129907310c2"/> + + <package name="protk" version="1.2.5"> + <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="1a4cb535ed4c"/> </package> <package name="blast+" version="2.2.27"> - <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e"/> + <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e" prior_installation_required="True"/> </package> + <package name="omssa" version="2.1.9"> + <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/> + <install version="1.0"> + <actions> + <action type="set_environment"> + <environment_variable name="PROTK_BLAST_ROOT" action="set_to">FROMPATH</environment_variable> + </action> + </actions> + </install> + <readme> + Sets environment variables for OMSSA + </readme> + </package> </tool_dependency>