# HG changeset patch
# User Ira Cooke <iracooke@gmail.com>
# Date 1383103287 -39600
# Node ID d5a82ba662c6d82a0536b81258e4076d99261649
# Parent  7d5c719ffbe29ff1fd20622484a6bb1833c0068b
Update dependencies

diff -r 7d5c719ffbe2 -r d5a82ba662c6 repository_dependencies.xml
--- a/repository_dependencies.xml	Wed Oct 30 14:01:36 2013 +1100
+++ b/repository_dependencies.xml	Wed Oct 30 14:21:27 2013 +1100
@@ -2,7 +2,7 @@
 <repositories description="Proteomics datatypes, omssa and blast executables">
 
 	<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="proteomics_datatypes" owner="iracooke" changeset_revision="7101f7e4b00b"/>
-	<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="c57f1eeb59dd"/>
+	<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="896483784a51"/>
 	<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/>
 	<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e"/>
 
diff -r 7d5c719ffbe2 -r d5a82ba662c6 tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Oct 30 14:01:36 2013 +1100
+++ b/tool_dependencies.xml	Wed Oct 30 14:21:27 2013 +1100
@@ -1,8 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
-
 	<package name="protk" version="1.2.5">
-		<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="c57f1eeb59dd"/>
+        <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="896483784a51"/>
     </package>
 
     <package name="blast+" version="2.2.27">
@@ -10,7 +9,7 @@
     </package>
 
     <package name="omssa" version="2.1.9">
-        <!-- <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/> -->
+        <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/>
         <install version="1.0">
             <actions>                   
                 <action type="set_environment">