# HG changeset patch
# User Ira Cooke <iracooke@gmail.com>
# Date 1383102096 -39600
# Node ID 7d5c719ffbe29ff1fd20622484a6bb1833c0068b
# Parent  52d137020163d439f385a7dd696826bd472e5d85
Update dependencies

diff -r 52d137020163 -r 7d5c719ffbe2 tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Oct 30 13:51:14 2013 +1100
+++ b/tool_dependencies.xml	Wed Oct 30 14:01:36 2013 +1100
@@ -1,25 +1,26 @@
 <?xml version="1.0"?>
 <tool_dependency>
 
-<!-- 	<package name="protk" version="1.2.5">
-		<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="e129907310c2"/>
+	<package name="protk" version="1.2.5">
+		<repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="c57f1eeb59dd"/>
     </package>
 
     <package name="blast+" version="2.2.27">
-        <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e" prior_installation_required="True" />
+        <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e" prior_installation_required="True"/>
     </package>
- -->
-	<package name="omssa" version="2.1.9">
-         <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/>
-		<install version="1.0">
-			<actions>                	
+
+    <package name="omssa" version="2.1.9">
+        <!-- <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/> -->
+        <install version="1.0">
+            <actions>                   
                 <action type="set_environment">
                     <environment_variable name="PROTK_BLAST_ROOT" action="set_to">FROMPATH</environment_variable>
                 </action>
             </actions>
         </install>
         <readme>
-        	Sets environment variables for OMSSA
+            Sets environment variables for OMSSA
         </readme>
     </package>
+
 </tool_dependency>