Mercurial > repos > iracooke > mascot
view tool-data/pepxml_databases.loc.sample @ 1:9ef7d54df0d4
Fix
author | Ira Cooke <iracooke@gmail.com> |
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date | Thu, 06 Jun 2013 15:36:20 +1000 |
parents | 9e715bfd28ea |
children |
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#This file lists the names of protein databases installed locally in protk. # These are used by omssa and x!tandem as well as the "mascot to pepxml" tool # In order to combine search results with Interprophet searches must be run against an identical database # # Entries should follow the be structured as follows # Display_name omssa_tandem_dbname dbkey # # Swissprot spall_ SwissProt spall_ Combined PlasmboDB (falciparum) and Swissprot Human plasmodb_pfalciparum_sphuman_ plasmodb_pfalciparum_sphuman plasmodb_pfalciparum_sphuman_ Swissprot Human sphuman_ sphuman sphuman_ Combined Swissprot/TRembl Human sptrhuman_ sptrhuman sptrhuman_ Swissprot Mouse spmouse_ spmouse spmouse_