Mercurial > repos > imgteam > imagecoordinates_flipaxis
comparison imagecoordinates_flipaxis.xml @ 2:fb68afb14731 draft default tip
"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/imagecoordinates_flipaxis/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
| author | imgteam |
|---|---|
| date | Wed, 18 Dec 2019 09:58:11 +0000 |
| parents | fb6b557a2937 |
| children |
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| 1:fb6b557a2937 | 2:fb68afb14731 |
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| 1 <tool id="imagecoordinates_flipaxis" name="Switch axis coordinates" version="0.1"> | 1 <tool id="imagecoordinates_flipaxis" name="Switch axis coordinates" version="0.1"> |
| 2 <description>Switches the axes of an image and flips the y axis.</description> | 2 <description>Switches the axes of an image and flips the y axis.</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="0.23.4" >pandas</requirement> | 4 <requirement type="package" version="0.23.4" >pandas</requirement> |
| 5 </requirements> | 5 </requirements> |
| 6 <command detect_errors="aggressive"> | 6 <command detect_errors="aggressive"> |
| 7 <![CDATA[ | 7 <![CDATA[ |
| 8 python "$__tool_directory__/imagecoordinates_flipaxis.py" '$input' '$output' $img_height | 8 python "$__tool_directory__/imagecoordinates_flipaxis.py" '$input' '$output' $img_height |
| 9 $offset_x $offset_y | 9 $offset_x $offset_y |
| 12 <inputs> | 12 <inputs> |
| 13 <param name="input" type="data" format="tabular" label="File with image coordinates"/> | 13 <param name="input" type="data" format="tabular" label="File with image coordinates"/> |
| 14 <param name="img_height" type="integer" value="100" label="Height of the corresponding image"/> | 14 <param name="img_height" type="integer" value="100" label="Height of the corresponding image"/> |
| 15 <param name="offset_x" type="integer" value="0" label="Added offset in x direction (=width direction)" /> | 15 <param name="offset_x" type="integer" value="0" label="Added offset in x direction (=width direction)" /> |
| 16 <param name="offset_y" type="integer" value="0" label="Added offset in y direction (=height direction)" /> | 16 <param name="offset_y" type="integer" value="0" label="Added offset in y direction (=height direction)" /> |
| 17 </inputs> | 17 </inputs> |
| 18 <outputs> | 18 <outputs> |
| 19 <data name="output" format="tabular"/> | 19 <data name="output" format="tabular"/> |
| 20 </outputs> | 20 </outputs> |
| 21 <tests> | 21 <tests> |
| 22 <test> | 22 <test> |