Mercurial > repos > imgteam > count_objects

comparison count_objects.xml @ 1:faa34f06aa6c draft

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"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/count_objects/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
author imgteam
date Wed, 18 Dec 2019 09:57:25 +0000
parents 784d5cf56c82
children 803426d364aa
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0:784d5cf56c82 1:faa34f06aa6c
1 <tool id="ip_count_objects" name="Count Objects" version="0.0.4"> 1 <tool id="ip_count_objects" name="Count Objects" version="0.0.4">
2 <description>in labled images</description> 2 <description>in labled images</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.14.2">scikit-image</requirement> 4 <requirement type="package" version="0.14.2">scikit-image</requirement>
5 <requirement type="package" version="1.15.4">numpy</requirement> 5 <requirement type="package" version="1.15.4">numpy</requirement>
6 <requirement type="package" version="0.15.1">tifffile</requirement>
6 </requirements> 7 </requirements>
7 <command> 8 <command>
8 <![CDATA[ 9 <![CDATA[
9 python '$__tool_directory__/count_objects.py' '$input' '$output' 10 python '$__tool_directory__/count_objects.py' '$input' '$output'
10 ]]> 11 ]]>
11 </command> 12 </command>
12 <inputs> 13 <inputs>
13 <param name="input" type="data" format="tiff" label="Source file" /> 14 <param name="input" type="data" format="tiff" label="Source file" />
14 </inputs> 15 </inputs>
15 <outputs> 16 <outputs>
16 <data format="tabular" name="output" /> 17 <data format="tabular" name="output" />
17 </outputs> 18 </outputs>