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1 <?xml version="1.0"?>
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2 <data_managers>
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2
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3 <data_manager tool_file="data_manager/rna_star_index_builder.xml" id="rna_star_index_builder_data_manager_custom" version="0.0.8">
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4 <data_table name="rnastar_index2x_versioned">
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5 <output>
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6 <column name="value" />
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7 <column name="dbkey" />
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8 <column name="name" />
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9 <column name="path" output_ref="out_file" >
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10 <move type="directory" relativize_symlinks="True">
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11 <!-- <source>${path}</source>
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12 out_file.extra_files_path is used as base by default
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13 if no source, eg for type=directory, then refers to base
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14 -->
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15 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rnastar/${version}/${dbkey}/${value}/${path}</target>
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16 </move>
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17 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rnastar/${version}/${dbkey}/${value}/${path}</value_translation>
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18 <value_translation type="function">abspath</value_translation>
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19 </column>
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20 <column name="with_gene_model" />
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21 <column name="version" />
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22 </output>
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23 </data_table>
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24 </data_manager>
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25 </data_managers>
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