comparison refinery_test_2-6.xml @ 8:ee221004e3b4 draft

Add an option to produce empty files.

7:5ac9c40dae35

<tool id="refinery_test_2-6" name="Refinery test tool 2-6" version="0.1">
    <description>for testing Galaxy workflow execution from Refinery</description>

    <command interpreter="python">
        refinery_test_tool.py -i $input_file1 $input_file2 -o $output_file1 $output_file2 $output_file3 $output_file4 $output_file5 $output_file6 -e $exit_code -p $p_fail -s $sleep_time $stdout $stderr
    </command>

    <inputs>
        <param name="input_file1" format="txt" type="data" label="Input file A"/>
        <param name="input_file2" format="txt" type="data" label="Input file B"/>
        <param name="sleep_time" type="integer" label="Sleep (seconds)" value="0" min="0"/>
        <param name="p_fail" type="float" label="Probability of failure [0.0, 1.0]" value="0.0" min="0.0" max="1.0"/>
        <param name="stdout" type="boolean" label="Write to standard out" truevalue="--stdout" falsevalue=""/>
        <param name="stderr" type="boolean" label="Write to standard error" truevalue="--stderr" falsevalue=""/>
        <param name="exit_code" type="integer" label="Exit code [0, 255]" value="0" min="0" max="255"/>
    </inputs>

8:ee221004e3b4

<tool id="refinery_test_2-6" name="Refinery test tool 2-6" version="0.1">
    <description>for testing Galaxy workflow execution from Refinery</description>

    <command interpreter="python">
        refinery_test_tool.py -i $input_file1 $input_file2 -o $output_file1 $output_file2 $output_file3 $output_file4 $output_file5 $output_file6 -e $exit_code -p $p_fail -s $sleep_time $stdout $stderr $empty_outfile
    </command>

    <inputs>
        <param name="input_file1" format="txt" type="data" label="Input file A"/>
        <param name="input_file2" format="txt" type="data" label="Input file B"/>
        <param name="sleep_time" type="integer" label="Sleep (seconds)" value="0" min="0"/>
        <param name="empty_outfile" type="boolean" label="Produce empty output files" truevalue="--empty_outfile" falsevalue=""/>
        <param name="p_fail" type="float" label="Probability of failure [0.0, 1.0]" value="0.0" min="0.0" max="1.0"/>
        <param name="stdout" type="boolean" label="Write to standard out" truevalue="--stdout" falsevalue=""/>
        <param name="stderr" type="boolean" label="Write to standard error" truevalue="--stderr" falsevalue=""/>
        <param name="exit_code" type="integer" label="Exit code [0, 255]" value="0" min="0" max="255"/>
    </inputs>