Mercurial > repos > hackdna > pathprint

view README @ 0:0cebe436a553 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Initial upload.
author hackdna
date Fri, 17 May 2013 14:29:33 -0400
parents
children
line wrap: on
line source

Each of these files describes the interface for one of the tools in Galaxy:

  * fingerprint.xml - Create Pathway Fingerprint
  * distance.xml - Calculate Distance to Consensus
  * similar-experiments.xml - Find Similar Experiments in GEO
  * histogram.xml - Generate a Histogram
  * heatmap.xml - Generate a Heatmap

Each interface calls a corresponding R file that performs the actions:

  * fingerprint.r
  * distance.r
  * similar-experiments.r
  * histogram.r
  * heatmap.r

Shared fuctions are kept in this file:

  * galaxy-pathprint.r