changeset 2:6ab252413da9 default tip

Change R dependency to a repository dependency on package_r_2_15_0
author Nate Coraor <nate@bx.psu.edu>
date Wed, 03 Dec 2014 15:50:55 -0500
parents 3eda7cc3555c
children
files hmm/tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 13 deletions(-) [+]
line wrap: on
line diff
--- a/hmm/tool_dependencies.xml	Mon Nov 12 14:52:05 2012 -0500
+++ b/hmm/tool_dependencies.xml	Wed Dec 03 15:50:55 2014 -0500
@@ -4,18 +4,6 @@
         <environment_variable name="R_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
     </set_environment>
     <package name="R" version="2.15.0">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://CRAN.R-project.org/src/base/R-2/R-2.15.0.tar.gz</action>
-                <action type="shell_command">./configure --prefix=$INSTALL_DIR</action>
-                <action type="shell_command">make</action>
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-You need a FORTRAN compiler or perhaps f2c in addition to a C compiler to build R.
-        </readme>
+        <repository changeset_revision="3a70cdc41d21" name="package_r_2_15_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>