Mercurial > repos > greg > snpeff_v2_from_pablo
directory /snpEff_2_1a/scripts/ @ 0:f8eaa3f8194b default tip
| name | size | permissions |
|---|---|---|
| [up] | drwxr-xr-x | |
 data/
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drwxr-xr-x | |
 ._bam2fastq.pl
|
170 | -rwxr-xr-x |
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._buildTestCases.sh
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170 | -rwxr-xr-x |
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._build_regulation.sh
|
170 | -rwxr-xr-x |
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._compareToEnsembl.sh
|
170 | -rwxr-xr-x |
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._distro.sh
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170 | -rwxr-xr-x |
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._download.sh
|
170 | -rwxr-xr-x |
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._fasta2tab.pl
|
170 | -rwxr-xr-x |
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._fastaSample.pl
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170 | -rwxr-xr-x |
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._fastaSplit.pl
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170 | -rwxr-xr-x |
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._file2GenomeName.pl
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170 | -rwxr-xr-x |
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._filterOutBoringPredictions.sh
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170 | -rwxr-xr-x |
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._filterOutBoringPredictionsVcf.sh
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170 | -rwxr-xr-x |
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._genesTxtColumnNames.sh
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170 | -rw-r--r-- |
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._hist.pl
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170 | -rwxr-xr-x |
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._joinSnpEff.pl
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170 | -rwxr-xr-x |
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._nOutOfM.pl
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170 | -rw-r--r-- |
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._promoterSequences.sh
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170 | -rwxr-xr-x |
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._proteinFasta2NM.pl
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170 | -rwxr-xr-x |
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._qqplot.pl
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170 | -rwxr-xr-x |
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._queue.pl
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170 | -rwxr-xr-x |
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._queue_build.sh
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170 | -rwxr-xr-x |
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._queue_build.txt
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170 | -rw-r--r-- |
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._queue_build_regulation.txt
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170 | -rw-r--r-- |
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._queue_dump.txt
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170 | -rw-r--r-- |
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._queue_test.sh
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170 | -rwxr-xr-x |
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._queue_test.txt
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170 | -rw-r--r-- |
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._randBedIntervals.pl
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170 | -rwxr-xr-x |
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._sift2vcf.pl
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170 | -rwxr-xr-x |
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._sift2vcf.sh
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170 | -rwxr-xr-x |
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._smoothScatter.pl
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170 | -rwxr-xr-x |
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._snpEff.sh
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170 | -rwxr-xr-x |
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._snpEffM.sh
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170 | -rwxr-xr-x |
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._snpEffXL.sh
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170 | -rwxr-xr-x |
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._snpSift.sh
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170 | -rwxr-xr-x |
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._test.Broad_NS_SYN.sh
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170 | -rwxr-xr-x |
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._uniqCount.pl
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170 | -rw-r--r-- |
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._vcfEffOnePerLine.pl
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170 | -rwxr-xr-x |
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._vcfSpeedTest.sh
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170 | -rwxr-xr-x |
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bam2fastq.pl
|
115 | -rwxr-xr-x |
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buildTestCases.sh
|
458 | -rwxr-xr-x |
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build_regulation.sh
|
68 | -rwxr-xr-x |
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compareToEnsembl.sh
|
238 | -rwxr-xr-x |
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distro.sh
|
1173 | -rwxr-xr-x |
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download.sh
|
2740 | -rwxr-xr-x |
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fasta2tab.pl
|
773 | -rwxr-xr-x |
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fastaSample.pl
|
797 | -rwxr-xr-x |
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fastaSplit.pl
|
1100 | -rwxr-xr-x |
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file2GenomeName.pl
|
621 | -rwxr-xr-x |
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filterOutBoringPredictions.sh
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252 | -rwxr-xr-x |
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filterOutBoringPredictionsVcf.sh
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259 | -rwxr-xr-x |
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genesTxtColumnNames.sh
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1024 | -rw-r--r-- |
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hist.pl
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2252 | -rwxr-xr-x |
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joinSnpEff.pl
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3482 | -rwxr-xr-x |
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nOutOfM.pl
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285 | -rw-r--r-- |
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promoterSequences.sh
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229 | -rwxr-xr-x |
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proteinFasta2NM.pl
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1149 | -rwxr-xr-x |
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qqplot.pl
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1978 | -rwxr-xr-x |
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queue.pl
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4084 | -rwxr-xr-x |
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queue_build.sh
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65 | -rwxr-xr-x |
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queue_build.txt
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18418 | -rw-r--r-- |
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queue_build_regulation.txt
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5817 | -rw-r--r-- |
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queue_dump.txt
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7421 | -rw-r--r-- |
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queue_test.sh
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64 | -rwxr-xr-x |
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queue_test.txt
|
15255 | -rw-r--r-- |
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randBedIntervals.pl
|
775 | -rwxr-xr-x |
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sift2vcf.pl
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770 | -rwxr-xr-x |
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sift2vcf.sh
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1430 | -rwxr-xr-x |
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smoothScatter.pl
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2141 | -rwxr-xr-x |
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snpEff.sh
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291 | -rwxr-xr-x |
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snpEffM.sh
|
290 | -rwxr-xr-x |
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snpEffXL.sh
|
292 | -rwxr-xr-x |
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snpSift.sh
|
590 | -rwxr-xr-x |
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test.Broad_NS_SYN.sh
|
887 | -rwxr-xr-x |
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uniqCount.pl
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198 | -rw-r--r-- |
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vcfEffOnePerLine.pl
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1450 | -rwxr-xr-x |
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vcfSpeedTest.sh
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116 | -rwxr-xr-x |