Mercurial > repos > greg > snpeff_v2_from_pablo

diff snpEff_2_1a/scripts/vcfSpeedTest.sh @ 0:f8eaa3f8194b default tip

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Uploaded snpEff_v2_1a_core.tgz from Pablo Cingolani
author greg
date Fri, 20 Apr 2012 14:47:09 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/snpEff_2_1a/scripts/vcfSpeedTest.sh	Fri Apr 20 14:47:09 2012 -0400
@@ -0,0 +1,8 @@
+#!/bin/sh
+
+for testNum in 1 2 3 4 
+do
+	./scripts/snpEffM.sh test $testNum test.1M.vcf > test.1M.out.vcf
+	echo
+done
+