Mercurial > repos > greg > phylogenomics_analysis

changeset 9:0ca4bba49038 draft

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Uploaded
author greg
date Thu, 05 Jan 2017 14:38:49 -0500
parents 9c43870f6c51
children b3712c598290
files phylogenomics_analysis.xml
diffstat 1 files changed, 4 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/phylogenomics_analysis.xml	Thu Jan 05 14:31:17 2017 -0500
+++ b/phylogenomics_analysis.xml	Thu Jan 05 14:38:49 2017 -0500
@@ -13,6 +13,10 @@
     <command>
         <![CDATA[
             #import os
+            #import sys
+            #if not os.exists($orthogroup_faa.extra_files_path):
+                print > sys.stderr("The select input is not a valid list of sequences classified into gene family clusters, select another input.")
+            #end if
             #set src_dir = $os.path.join('phylogenomicsAnalysis_dir', 'orthogroups_fasta')
             #set dest_dir = $output.extra_files_path
             mkdir -p $dest_dir &&