# HG changeset patch
# User greg
# Date 1486736908 18000
# Node ID ebc846754dcbfd305debf9ee41a589b29b0b91d6
# Parent  32c3bf33cad7c6602adba6aa9b9d5e01adef845a
Uploaded

diff -r 32c3bf33cad7 -r ebc846754dcb phylogenomics_analysis.xml
--- a/phylogenomics_analysis.xml	Fri Feb 10 09:05:32 2017 -0500
+++ b/phylogenomics_analysis.xml	Fri Feb 10 09:28:28 2017 -0500
@@ -73,6 +73,7 @@
                 --orthogroup_faa '$input_format_cond.input_ptortho.extra_files_path'
             #else:
                 --orthogroup_faa '$input_format_cond.input_ptorthocs.extra_files_path'
+                --orthogroup_fna
             #end if
             --scaffold_dir '$scaffold_dir'
             --scaffold '$scaffold_selection'