# HG changeset patch # User greg # Date 1483801632 18000 # Node ID 99c91d79fddefc947c79022b9e158b7a26d2f9ad # Parent 48479c94a6f3e5f7517712a86d49fe53733242c2 Uploaded diff -r 48479c94a6f3 -r 99c91d79fdde phylogenomics_analysis.xml --- a/phylogenomics_analysis.xml Sat Jan 07 10:04:33 2017 -0500 +++ b/phylogenomics_analysis.xml Sat Jan 07 10:07:12 2017 -0500 @@ -130,7 +130,7 @@ && mv $src_fasta_dir/* $dest_fasta_dir #if $generate_output_aln: - && echo "Sequence alignments, corresponding phylogenies and multiple sequence alignments using method '`$multiple_sequence_alignments_option`': `ls $src_aln_dir | wc -l` files" > $output_aln + && echo "Sequence alignments, corresponding phylogenies and multiple sequence alignments using method '$multiple_sequence_alignments_option': `ls $src_aln_dir | wc -l` files" > $output_aln && ls $src_aln_dir >> $output_aln && mv $src_aln_dir/* $dest_aln_dir #end if