# HG changeset patch
# User greg
# Date 1483800661 18000
# Node ID 86a469a50fc4227c11eace0e474707963a747645
# Parent  d34a42c6affb69ff8b803d203ff5fb625f8f8b86
Uploaded

diff -r d34a42c6affb -r 86a469a50fc4 phylogenomics_analysis.xml
--- a/phylogenomics_analysis.xml	Sat Jan 07 09:48:59 2017 -0500
+++ b/phylogenomics_analysis.xml	Sat Jan 07 09:51:01 2017 -0500
@@ -33,7 +33,7 @@
             #set src_fasta_dir = $os.path.join('phylogenomicsAnalysis_dir', 'orthogroups_fasta')
             #set dest_fasta_dir = $output_fasta.extra_files_path
 
-            #if str($options_type.options_type_selector) == 'advanced' and str($options_type.multiple_sequence_alignments_cond.multiple_sequence_alignments) == 'yes' and str($options_type.multiple_sequence_alignments_cond.multiple_sequence_alignments_option_cond.multiple_sequence_alignments_option == 'pasta_alignments':
+            #if str($options_type.options_type_selector) == 'advanced' and str($options_type.multiple_sequence_alignments_cond.multiple_sequence_alignments) == 'yes' and str($options_type.multiple_sequence_alignments_cond.multiple_sequence_alignments_option_cond.multiple_sequence_alignments_option) == 'pasta_alignments':
                 #set generate_output_aln = True
                 #set src_aln_dir = $os.path.join('phylogenomicsAnalysis_dir', 'orthogroups_aln')
                 #set dest_aln_dir = $output_aln.extra_files_path