# HG changeset patch
# User greg
# Date 1490273896 14400
# Node ID 467fb23ee966177e13a3ca66d8e2c1ea95e83327
# Parent  3f8cbca74ec4c13c5fd155f58153495a41646d0e
Uploaded

diff -r 3f8cbca74ec4 -r 467fb23ee966 macros.xml
--- a/macros.xml	Thu Mar 23 08:56:32 2017 -0400
+++ b/macros.xml	Thu Mar 23 08:58:16 2017 -0400
@@ -67,19 +67,20 @@
             <option value="yes">Yes</option>
         </param>
     </xml>
+    <xml name="options_multiple_sequence_alignments_option">
+        <option value="create_alignments">Create orthogroup protein multiple sequence alignments including scaffold backbone proteins (MAFFT algorithm)</option>
+        <option value="add_alignments">Add unaligned orthogroup proteins to scaffold backbone multiple sequence alignments (MAFFT algorithm)</option>
+        <option value="pasta_alignments">Create orthogroup protein multiple sequence alignments including scaffold backbone proteins (PASTA algorithm)</option>
+    </xml>
     <xml name="param_multiple_sequence_alignments_option">
         <param name="multiple_sequence_alignments_option" type="select" force_select="true" label="Select method for multiple sequence alignments">
-            <option value="create_alignments">Create orthogroup protein multiple sequence alignments including scaffold backbone proteins (MAFFT algorithm)</option>
-            <option value="add_alignments">Add unaligned orthogroup proteins to scaffold backbone multiple sequence alignments (MAFFT algorithm)</option>
-            <option value="pasta_alignments">Create orthogroup protein multiple sequence alignments including scaffold backbone proteins (PASTA algorithm)</option>
+            <expand macro="options_multiple_sequence_alignments_option" />
         </param>
     </xml>
     <xml name="cond_multiple_sequence_alignments_option_with_iterative_realignments">
         <conditional name="multiple_sequence_alignments_option_cond">
             <param name="multiple_sequence_alignments_option" type="select" force_select="true" label="Select method for multiple sequence alignments">
-                <option value="create_alignments">Create orthogroup protein multiple sequence alignments including scaffold backbone proteins (MAFFT algorithm)</option>
-                <option value="add_alignments">Add unaligned orthogroup proteins to scaffold backbone multiple sequence alignments (MAFFT algorithm)</option>
-                <option value="pasta_alignments">Create orthogroup protein multiple sequence alignments including scaffold backbone proteins (PASTA algorithm)</option>
+                <expand macro="options_multiple_sequence_alignments_option" />
                 <option value="iterative_realignments">Iterative orthogroups realignment, trimming and fitering</option>
             </param>
             <expand macro="whens_multiple_sequence_alignments_option_cond" />