diff phylogenomics_analysis.xml @ 100:283f6666daf7 draft

Uploaded

--- a/phylogenomics_analysis.xml	Mon Mar 27 09:57:54 2017 -0400
+++ b/phylogenomics_analysis.xml	Mon Mar 27 10:42:37 2017 -0400
@@ -143,18 +143,10 @@
         </conditional>
     </inputs>
     <outputs>
-        <data name="output_ptortho" format="ptortho">
-            <filter>input_format_cond['input_format'] == 'ptortho'</filter>
-        </data>
-        <data name="output_ptorthocs" format="ptorthocs">
-            <filter>input_format_cond['input_format'] == 'ptorthocs'</filter>
-        </data>
-        <data name="output_aln" format="ptalign" label="Multiple alignments (method ${options_type_cond['multiple_sequence_alignments_cond']['multiple_sequence_alignments_option_cond']['multiple_sequence_alignments_option']}) on ${on_string}">
-            <filter>options_type_cond['options_type'] == 'advanced' and options_type_cond['multiple_sequence_alignments_cond']['multiple_sequence_alignments'] == 'yes'</filter>
-        </data>
-        <data name="output_tree" format="pttree" label="Phylogenetic trees on ${on_string}">
-            <filter>options_type_cond['options_type'] == 'advanced' and options_type_cond['phylogenetic_trees_cond']['phylogenetic_trees'] == 'yes'</filter>
-        </data>
+        <expand macro="output_ptortho" />
+        <expand macro="output_ptorthocs" />
+        <expand macro="output_aln" />
+        <expand macro="output_tree" />
     </outputs>
     <tests>
         <test>