Mercurial > repos > greg > phylogenomics_analysis
comparison phylogenomics_analysis.xml @ 33:d8e7ac110e1b draft
Uploaded
| author | greg |
|---|---|
| date | Thu, 12 Jan 2017 09:42:38 -0500 |
| parents | c2ec4bb1fd5f |
| children | 01c89742cb39 |
comparison
equal
deleted
inserted
replaced
| 32:c2ec4bb1fd5f | 33:d8e7ac110e1b |
|---|---|
| 92 #if str($multiple_sequence_alignments_option) == 'create_alignments': | 92 #if str($multiple_sequence_alignments_option) == 'create_alignments': |
| 93 --create_alignments | 93 --create_alignments |
| 94 #else if str($multiple_sequence_alignments_option) == 'add_alignments': | 94 #else if str($multiple_sequence_alignments_option) == 'add_alignments': |
| 95 --add_alignments | 95 --add_alignments |
| 96 #else if str($multiple_sequence_alignments_option) == 'pasta_alignments': | 96 #else if str($multiple_sequence_alignments_option) == 'pasta_alignments': |
| 97 --pasta_script_path "$__tool_directory__/run_pasta.py" | |
| 97 --pasta_alignments | 98 --pasta_alignments |
| 98 --pasta_iter_limit $multiple_sequence_alignments_option_cond.pasta_iter_limit | 99 --pasta_iter_limit $multiple_sequence_alignments_option_cond.pasta_iter_limit |
| 99 #end if | 100 #end if |
| 100 | 101 |
| 101 #if str($input_includes_coding_sequences) == 'yes': | 102 #if str($input_includes_coding_sequences) == 'yes': |