Mercurial > repos > greg > multigps
comparison multigps.xml @ 44:d1a381f360f6 draft
Uploaded
| author | greg |
|---|---|
| date | Thu, 09 Feb 2017 13:57:22 -0500 |
| parents | 181076e82999 |
| children | 9ab09dfb69af |
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| 43:181076e82999 | 44:d1a381f360f6 |
|---|---|
| 40 #set sdc = $aoc.scale_data_cond | 40 #set sdc = $aoc.scale_data_cond |
| 41 #set umc = $aoc.use_motif_cond | 41 #set umc = $aoc.use_motif_cond |
| 42 #if str($umc.use_motif) == 'yes': | 42 #if str($umc.use_motif) == 'yes': |
| 43 #set rgc = $umc.reference_genome_cond | 43 #set rgc = $umc.reference_genome_cond |
| 44 #if str($rgc.reference_genome_source) == 'cached': | 44 #if str($rgc.reference_genome_source) == 'cached': |
| 45 #set seq = '$rgc.reference_genome.fields.path' | 45 #set seq = $rgc.reference_genome.fields.path |
| 46 #else: | 46 #else: |
| 47 #set seq = '$rgc.reference_genome' | 47 #set seq = $rgc.reference_genome |
| 48 #end if | 48 #end if |
| 49 --seq $seq | 49 --seq '$seq' |
| 50 #end if | 50 #end if |
| 51 ############################ | 51 ############################ |
| 52 ## Limits on how many reads | 52 ## Limits on how many reads |
| 53 ############################ | 53 ############################ |
| 54 #if str($rloc.reads_limits) == 'yes': | 54 #if str($rloc.reads_limits) == 'yes': |