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annotate test-data/meme_input_1.fasta @ 0:d0dd3c0acdca draft default tip

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author greg
date Mon, 11 Jan 2016 13:33:25 -0500
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1 >chr21_19617074_19617124_+
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2 AAAAATTATTACTAGGGAGGGGGCCGGAACCTCGGGACGTGGGTATATAA
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3 >chr21_26934381_26934431_+
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4 GCGCCTGGTCGGTTATGAGTCACAAGTGAGTTATAAAAGGGTCGCACGTT
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5 >chr21_28217753_28217803_-
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6 CAAAGGGGAGGAGTGGGGTGGGGGTGGGGGTTTCACTGGTCCACTATAAA
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7 >chr21_31710037_31710087_-
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8 AACACCCAGGTTTCTGAGTATATAATCGCCGCACCAAAGAATTTAATTTT
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9 >chr21_31744582_31744632_-
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10 CCCAGGTCTAAGAGCATATATAACTTGGAGTCCAGACTATGACATTCAAA
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11 >chr21_31768316_31768366_+
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12 AACGTATATAAATGGTCCTGTCCAGATGTGGCATGCAAACTCAGAATCTT
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13 >chr21_31914206_31914256_-
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14 TGACACCCACTACTTAGAGTATAAAATCATTCTGAGAAGTTAGAGACACC
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15 >chr21_31933633_31933683_-
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16 TCAGAGTATATATAAATGTTCCTGTCCAGTCACAGTCACCAAACTGACCT
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17 >chr21_31962741_31962791_-
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18 ACATATAACTCAGGTTGGATAAAATAATTTGTACAAATCAGGAGAGTCAA
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19 >chr21_31964683_31964733_+
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20 TCTGATTCACTGAGGCATATAAAAGGCCCTCTGCGGAGAAGTGTCCATAC
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21 >chr21_31973364_31973414_+
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22 aaacttaaaactctataaacttaaaactCTAGAATCTGATCCTGCTATAC
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23 >chr21_31992870_31992920_+
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24 CTCATACACTATTGAAGATGTATAAAATTTCATTTGCAGATGGTGACATT
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25 >chr21_32185595_32185645_-
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26 TCACCACCCACCAGAGCTGGGATATATAAAGAAGGTTCTGAGACTAGGAA
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27 >chr21_32202076_32202126_-
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28 TGCCCACCAGCTTGAGGTATAAAAAGCCCTGTACGGGAAGAGACCTTCAT
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29 >chr21_32253899_32253949_-
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30 AGCCCCACCCACCAGCAAGGATATATAAAAGCTCAGGAGTCTGGAGTGAC
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31 >chr21_32410820_32410870_-
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32 TCTACCCCACTAATCACTGAGGATGTATAAAAGTCCCAGGGAAGCTGGTG
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33 >chr21_36411748_36411798_-
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34 ATAGTTCTGTATAGTTTCAGTTGGCATCtaaaaattatataactttattt
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35 >chr21_37838750_37838800_-
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36 gatggttttataaggggcctcaccctcggctcagccctcattcttctcct
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37 >chr21_45705687_45705737_+
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38 CCGGGGCGGAGCGGCCTTTGCTCTTTGCGTGGTCGCGGGGGTATAACAGC
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39 >chr21_45971413_45971463_-
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40 CAGGCCCTGGGCATATAAAAGCCCCAGCAGCCAACAGGctcacacacaca
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41 >chr21_45978668_45978718_-
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42 CAGAGGGGTATAAAGGTTCCGACCACTCAGAGGCCTGGCACGAtcactca
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43 >chr21_45993530_45993580_+
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44 CCAAGGAGGAGTATAAAAGCCCCACAAACCCGAGCACCTCACTCACTCGC
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45 >chr21_46020421_46020471_+
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46 GAGACATATAAAAGCCAACATCCCTGAGCACCTAACACACGGactcactc
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47 >chr21_46031920_46031970_+
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48 GGAAAATACCCAGGGAGGGTATAAAACCTCAGCAGCCAGGGCACACAAAC
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49 >chr21_46046964_46047014_+
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50 ACAAGGCCAGGAGGGGTATAAAAGCCTGAGAGCCCCAAGAACctcacaca
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51 >chr21_46057197_46057247_+
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52 ATTGCTGAGTCTCCTGCTGGGAAAACACAGGCCCTGGGCATATAAAAGCC
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53 >chr21_46086869_46086919_-
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54 GACAGGTGTGCTTCTGTGCTGTGGGGATGCCTGGGCCCAGGTATAAAGGC
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55 >chr21_46102103_46102153_-
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56 AGGTGTGTGCTTCTGTGCTGTGGGGATGCCTGGGTCCAGGTATAAAGGCT
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57 >chr21_47517957_47518007_+
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58 CCTGGCGGCGGGGCGGGTCAGGCCGGCGGGGCGGGGTATAAAGGGGGCGG
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59 >chr21_47517957_47518007_+
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60 CCTGGCGGCGGGGCGGGTCAGGCCGGCGGGGCGGGGTATAAAGGGGGCGG
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61 >chr21_47517957_47518007_+
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62 CCTGGCGGCGGGGCGGGTCAGGCCGGCGGGGCGGGGTATAAAGGGGGCGG
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63 >chr21_47575506_47575556_-
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64 TGAGAAGCCGGTGGGGAGGTGCTGCCGGTGAGCGTATAAAGGCCCTGGCG
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65 >chr21_47575506_47575556_-
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66 TGAGAAGCCGGTGGGGAGGTGCTGCCGGTGAGCGTATAAAGGCCCTGGCG