Mercurial > repos > greg > ks_distribution
comparison ks_distribution.R @ 16:b77b3f8781cd draft
Uploaded
| author | greg |
|---|---|
| date | Fri, 23 Jun 2017 14:44:53 -0400 |
| parents | 1f6943662833 |
| children | 828b43bcf2ac |
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| 15:64406daa84f1 | 16:b77b3f8781cd |
|---|---|
| 1 #!/usr/bin/env Rscript | 1 #!/usr/bin/env Rscript |
| 2 | 2 |
| 3 suppressPackageStartupMessages(library("optparse")) | 3 suppressPackageStartupMessages(library("optparse")) |
| 4 suppressPackageStartupMessages(library("rjson")) | |
| 5 | 4 |
| 6 option_list <- list( | 5 option_list <- list( |
| 7 make_option(c("-c", "--components_input"), action="store", dest="components_input", help="Ks significant components input dataset"), | 6 make_option(c("-c", "--components_input"), action="store", dest="components_input", help="Ks significant components input dataset"), |
| 8 make_option(c("-k", "--kaks_input"), action="store", dest="kaks_input", help="KaKs analysis input dataset"), | 7 make_option(c("-k", "--kaks_input"), action="store", dest="kaks_input", help="KaKs analysis input dataset"), |
| 9 make_option(c("-n", "--num_comp"), action="store", dest="num_comp", type="integer", help="Number of significant components in the Ks distribution"), | 8 make_option(c("-n", "--num_comp"), action="store", dest="num_comp", type="integer", help="Number of significant components in the Ks distribution"), |