comparison ks_distribution.R @ 57:5db52c7bdccb draft

Uploaded

56:d79951635f5d

option_list <- list(
    make_option(c("-c", "--components_input"), action="store", dest="components_input", help="Ks significant components input dataset"),
    make_option(c("-k", "--kaks_input"), action="store", dest="kaks_input", help="KaKs analysis input dataset"),
    make_option(c("-n", "--number_comp"), action="store", dest="number_comp", type="integer", help="Number of significant components in the Ks distribution"),
    make_option(c("-o", "--output"), action="store", dest="output", help="Output dataset"),
    make_option(c("-r", "--colors"), action="store", dest=colors", default=NA, help="List of component colors")
)

parser <- OptionParser(usage="%prog [options] file", option_list=option_list)
args <- parse_args(parser, positional_arguments=TRUE)
opt <- args$options

57:5db52c7bdccb

option_list <- list(
    make_option(c("-c", "--components_input"), action="store", dest="components_input", help="Ks significant components input dataset"),
    make_option(c("-k", "--kaks_input"), action="store", dest="kaks_input", help="KaKs analysis input dataset"),
    make_option(c("-n", "--number_comp"), action="store", dest="number_comp", type="integer", help="Number of significant components in the Ks distribution"),
    make_option(c("-o", "--output"), action="store", dest="output", help="Output dataset"),
    make_option(c("-r", "--colors"), action="store", dest="colors", default=NA, help="List of component colors")
)

parser <- OptionParser(usage="%prog [options] file", option_list=option_list)
args <- parse_args(parser, positional_arguments=TRUE)
opt <- args$options