Mercurial > repos > greg > ks_distribution

comparison ks_distribution.xml @ 66:02de4eb54f27 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Thu, 24 Aug 2017 13:42:44 -0400
parents c5fb4e2ed4e2
children 0eddf85f0f29
comparison
equal deleted inserted replaced
65:ad406d4702b2 66:02de4eb54f27
1 <tool id="ks_distribution" name="KsDistribution" version="1.0.1"> 1 <tool id="ks_distribution" name="KsDistribution" version="@WRAPPER_VERSION@.2">
2 <description>plots the distribution of synonymous substitution (Ks) rates and fits significant component(s)</description> 2 <description>plots the distribution of synonymous substitution (Ks) rates and fits significant component(s)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements_ks_distribution" /> 6 <expand macro="requirements_ks_distribution" />
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 Rscript $__tool_directory__/ks_distribution.R 8 Rscript '$__tool_directory__/ks_distribution.R'
9 -k '$input' 9 -k '$input'
10 -c '$components' 10 -c '$components'
11 -n $components.metadata.number_comp 11 -n $components.metadata.number_comp
12 -o '$output' 12 -o '$output'
13 #if str($choose_colors_cond.choose_colors) == 'yes': 13 #if str($choose_colors_cond.choose_colors) == 'yes':