Mercurial > repos > greg > ideas_genome_tracks

changeset 2:9b5cd5624bd5 draft

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Uploaded
author greg
date Wed, 15 Nov 2017 13:07:56 -0500
parents fe50d06f7052
children 043abdc3f030
files ideas_genome_tracks.xml
diffstat 1 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/ideas_genome_tracks.xml	Wed Nov 15 13:03:16 2017 -0500
+++ b/ideas_genome_tracks.xml	Wed Nov 15 13:07:56 2017 -0500
@@ -8,9 +8,10 @@
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 #import os
+#set cwd = $os.getcwd()
 #set dbkey = None
-#set input_dir_para = os.path.abspath('input_dir_para')
-#set input_dir_state = os.path.abspath('input_dir_state')
+#set input_dir_para = os.path.abspath(os.path.join($cwd, 'input_dir_para'))
+#set input_dir_state = os.path.abspath(os.path.join($cwd, 'input_dir_state')
 mkdir $input_dir_para &&
 mkdir $input_dir_state &&
 #for $i in $input: