# HG changeset patch # User greg # Date 1502383303 14400 # Node ID 4b0f64ae5923dd3e376a3d7f10576225bd42019f # Parent 445bafcf9a4b3a9aaf7dc7b6074af017051cd73f Uploaded diff -r 445bafcf9a4b -r 4b0f64ae5923 ideas.xml --- a/ideas.xml Thu Aug 10 12:38:50 2017 -0400 +++ b/ideas.xml Thu Aug 10 12:41:43 2017 -0400 @@ -53,9 +53,9 @@ ## Build the R matrix from the prepMat output ############################################## #set r_matrix_input = None -#for f in $os.listdir(tmp): +#for f in $os.listdir('tmp'): #if f.endswith('.bed.gz'): - #set r_matrix_input = $os.path.join(tmp, f) + #set r_matrix_input = $os.path.join('tmp', f) #end if #end for #assert $r_matrix_input is not None and $os.path.getsize($r_matrix_input) > 0, "Output file from prepMat is missing or empty."