Mercurial > repos > greg > ideas
comparison ideas.xml @ 126:dcc642e255ec draft
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| author | greg |
|---|---|
| date | Tue, 21 Nov 2017 14:46:55 -0500 |
| parents | 5e545c9030a0 |
| children | de93d8e8a096 |
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| 125:5e545c9030a0 | 126:dcc642e255ec |
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| 57 ## generate a text file that categorizes the | 57 ## generate a text file that categorizes the |
| 58 ## window positions by chromosome to enable | 58 ## window positions by chromosome to enable |
| 59 ## the IDEAS -inv option. | 59 ## the IDEAS -inv option. |
| 60 ############################################## | 60 ############################################## |
| 61 #if str($specify_genomic_window) == "yes": | 61 #if str($specify_genomic_window) == "yes": |
| 62 && python '$__tool_directory__/create_window_positions_by_chrome.py' | 62 && python '$__tool_directory__/create_window_positions_by_chrom.py' |
| 63 --input '$specify_genomic_window_cond.bed_input' | 63 --input '$specify_genomic_window_cond.bed_input' |
| 64 --output $window_positions_by_chrom | 64 --output $window_positions_by_chrom |
| 65 #end if | 65 #end if |
| 66 ############################################## | 66 ############################################## |
| 67 ## Run IDEAS | 67 ## Run IDEAS |
