comparison gene_family_classifier.py @ 157:387802cb9170 draft

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156:ece27a1eeb5d

            shutil.move(src_hmmscan_log, args.hmmscan_log)

# Handle orthogroups outputs.
if create_ortho_sequences:
    orthogroups_fasta_src_dir = os.path.join(OUTPUT_DIR, 'orthogroups_fasta')
    orthogroups_fasta_dest_dir = 'output_orthos_dir'
    if not os.path.isdir(orthogroups_fasta_dest_dir):
        os.makedirs(orthogroups_fasta_dest_dir)
    # Remove source direrctory so it won't break dataset collection handler.
    utils.move_directory_files(orthogroups_fasta_src_dir, orthogroups_fasta_dest_dir, remove_source_dir=True)

157:387802cb9170

            shutil.move(src_hmmscan_log, args.hmmscan_log)

# Handle orthogroups outputs.
if create_ortho_sequences:
    orthogroups_fasta_src_dir = os.path.join(OUTPUT_DIR, 'orthogroups_fasta')
    orthogroups_fasta_dest_dir = 'output_orthogroups_fasta_dir'
    if not os.path.isdir(orthogroups_fasta_dest_dir):
        os.makedirs(orthogroups_fasta_dest_dir)
    # Remove source direrctory so it won't break dataset collection handler.
    utils.move_directory_files(orthogroups_fasta_src_dir, orthogroups_fasta_dest_dir, remove_source_dir=True)