# HG changeset patch
# User greg
# Date 1452452207 18000
# Node ID 79167132946dd6f2b8693b2570e5b62bbed18c5a
# Parent  4dc6890db1123e96ee97d0e872b88965fa909426
Uploaded

diff -r 4dc6890db112 -r 79167132946d fasta_extract.py
--- a/fasta_extract.py	Sun Jan 10 13:52:44 2016 -0500
+++ b/fasta_extract.py	Sun Jan 10 13:56:47 2016 -0500
@@ -45,13 +45,13 @@
     extend_existing = args.extend_existing == 'existing'
     consider_strand = args.strand == 'yes'
     reader = csv.reader(open(input_filename, 'rU'), delimiter='\t')
-    fasta_output_path = get_output_path(args.hid,
+    fasta_output_path = get_output_path(hid,
                                         args.subtract_from_start,
                                         args.add_to_end,
                                         extend_existing,
                                         consider_strand)
     output = open(fasta_output_path, 'wb')
-    gff_output_path = get_output_path(args.hid,
+    gff_output_path = get_output_path(hid,
                                       args.subtract_from_start,
                                       args.add_to_end,
                                       extend_existing,