# HG changeset patch # User greg # Date 1533129535 14400 # Node ID fd41f452c9fee71993e48462077e99aa4c749d64 # Parent cf6a06a2346c0bc66f7b3403657c77a0803716c0 Uploaded diff -r cf6a06a2346c -r fd41f452c9fe extract_ipm_date_interval.R --- a/extract_ipm_date_interval.R Wed Aug 01 09:17:15 2018 -0400 +++ b/extract_ipm_date_interval.R Wed Aug 01 09:18:55 2018 -0400 @@ -51,7 +51,7 @@ # Display the total number of days in the Galaxy history item blurb. cat("Number of days in date interval: ", num_days, "\n"); -input_files = list.files(path=input_dir, full.names=TRUE); +input_files = list.files(path=opt$input_dir, full.names=TRUE); for(input_file in input_files) { temperature_data_frame = get_new_temperature_data_frame(input_file); start_date_row = which(temperature_data_frame$DATE==start_date);