# HG changeset patch # User greg # Date 1509885832 18000 # Node ID 0c3113fdfae6d0009aa02fff43ccd69941373652 # Parent 814082359f36a6802daf70429de185991b7e44fb Uploaded diff -r 814082359f36 -r 0c3113fdfae6 dmri.py --- a/dmri.py Sun Nov 05 07:35:51 2017 -0500 +++ b/dmri.py Sun Nov 05 07:43:52 2017 -0500 @@ -20,11 +20,14 @@ input_dir = args.drmi_dataset if args.drmi_dataset == 'sherbrooke_3shell': fetch_sherbrooke_3shell() + fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') + fbval = os.path.join(input_dir, 'HARDI193.bval') + fbvec = os.path.join(input_dir, 'HARDI193.bvec') elif args.drmi_dataset == 'stanford_hardi': fetch_stanford_hardi() -fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') -fbval = os.path.join(input_dir, 'HARDI193.bval') -fbvec = os.path.join(input_dir, 'HARDI193.bvec') + fdwi = os.path.join(input_dir, 'HARDI150.nii.gz') + fbval = os.path.join(input_dir, 'HARDI150.bval') + fbvec = os.path.join(input_dir, 'HARDI150.bvec') # Load the dMRI datasets. img = nibabel.load(fdwi) data = img.get_data()