Mercurial > repos > greg > drmi
comparison dmri.py @ 10:5014ba48e15e draft
Uploaded
| author | greg |
|---|---|
| date | Fri, 03 Nov 2017 13:46:21 -0400 |
| parents | cf847e9f1a3a |
| children | 173c5c07b2f9 |
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| 9:cf847e9f1a3a | 10:5014ba48e15e |
|---|---|
| 10 parser.add_argument('--input', dest='input', help='Input dataset') | 10 parser.add_argument('--input', dest='input', help='Input dataset') |
| 11 parser.add_argument('--output', dest='output', help='Output dataset') | 11 parser.add_argument('--output', dest='output', help='Output dataset') |
| 12 | 12 |
| 13 args = parser.parse_args() | 13 args = parser.parse_args() |
| 14 | 14 |
| 15 input_dir = os.path.join('.dipy', 'sherbrooke_3shell') | 15 input_dir = 'sherbrooke_3shell' |
| 16 # Get input data. | 16 # Get input data. |
| 17 fetch_sherbrooke_3shell() | 17 fetch_sherbrooke_3shell() |
| 18 fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') | 18 fdwi = os.path.join(input_dir, 'HARDI193.nii.gz') |
| 19 fbval = os.path.join(input_dir, 'HARDI193.bval') | 19 fbval = os.path.join(input_dir, 'HARDI193.bval') |
| 20 fbvec = os.path.join(input_dir, 'HARDI193.bvec') | 20 fbvec = os.path.join(input_dir, 'HARDI193.bvec') |