Mercurial > repos > greg > assembly_post_processor

changeset 3:d651432961fb draft

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Uploaded
author greg
date Wed, 11 Jan 2017 13:32:42 -0500
parents 4eb05d406410
children 842c77ce5fd8
files assembly_post_processor.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/assembly_post_processor.xml	Mon Dec 19 09:48:31 2016 -0500
+++ b/assembly_post_processor.xml	Wed Jan 11 13:32:42 2017 -0500
@@ -35,6 +35,7 @@
             #end if
             --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds"
             --num_threads \${GALAXY_SLOTS:-4}
+            --no_config_override
         ]]>
     </command>
     <inputs>
@@ -75,7 +76,7 @@
                         </param>
                     </when>
                 </conditional>
-                <param name="gap_trimming" type="float" value="0.1" min="0" max="1.0" label="Remove gappy sites in alignments" help="0.1 removes sites with 90% gaps"/>
+                <param name="gap_trimming" type="float" value="0.1" min="0" max="1.0" label="Remove sites in alignments with gaps of" help="0.1 removes sites with 90% gaps"/>
                 <param name="strand_specific" type="select" label="De novo transcriptome assembly was performed with strand-specific library?">
                     <option value="no" selected="true">No</option>
                     <option value="yes">Yes</option>