# HG changeset patch
# User greg
# Date 1485888133 18000
# Node ID ef522c398ad45d7e24fb97646e3e8a7cef406396
# Parent  db0c2baf176fac37c8be747de641c587d8fed1f6
Uploaded

diff -r db0c2baf176f -r ef522c398ad4 assembly_post_processor.xml
--- a/assembly_post_processor.xml	Tue Jan 31 13:34:49 2017 -0500
+++ b/assembly_post_processor.xml	Tue Jan 31 13:42:13 2017 -0500
@@ -22,9 +22,9 @@
             #end if
             #if str($options_type.options_type_selector) == 'advanced':
                 #if str($options_type.target_gene_family_assembly_cond.target_gene_family_assembly) == 'yes':
-                    #set scaffold_path = '$options_type.target_gene_family_assembly_cond.scaffold.path'
-                    #set scaffold_dir = os.path.split($scaffold_path)[0]
-                    #set scaffold = os.path.split($scaffold_path)[1]
+                    #set scaffold_path = $options_type.target_gene_family_assembly_cond.scaffold.path
+                    #set scaffold_dir = $os.path.split($scaffold_path)[0]
+                    #set scaffold = $os.path.split($scaffold_path)[1]
                     --gene_family_search '$options_type.target_gene_family_assembly_cond.orthogroups'
                     --scaffold_dir $scaffold_dir
                     --scaffold $scaffold