# HG changeset patch
# User greg
# Date 1495462561 14400
# Node ID 3d2aff5a0c07c749b688ccea7897a6dd2ddd03e7
# Parent  5c221f721b95e4d29a957c51622ddce517ac63ed
Uploaded

diff -r 5c221f721b95 -r 3d2aff5a0c07 assembly_post_processor.xml
--- a/assembly_post_processor.xml	Mon May 22 10:12:00 2017 -0400
+++ b/assembly_post_processor.xml	Mon May 22 10:16:01 2017 -0400
@@ -13,8 +13,8 @@
                 --score_matrices '$score_matrices'
             #end if
             #if str($options_type.options_type_selector) == 'advanced':
-                #if str($) == 'yes':
-                    #set target_gene_family_assembly_cond = $options_type.target_gene_family_assembly_cond
+                #set target_gene_family_assembly_cond = $options_type.target_gene_family_assembly_cond
+                #if str($target_gene_family_assembly_cond.target_gene_family_assembly) == 'yes':
                     --gene_family_search '$target_gene_family_assembly_cond.orthogroups'
                     --output_pttgf $output_pttgf
                     --output_pttgf_dir $output_pttgf.files_path