Mercurial > repos > greg > assembly_post_processor

diff test-data/transcripts2.pep @ 69:61f9552be416 draft

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author greg
date Tue, 06 Jun 2017 08:31:58 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/transcripts2.pep	Tue Jun 06 08:31:58 2017 -0400
@@ -0,0 +1,25 @@
+>contig_1; 91 1 346  minus strand; translated
+XKKLYGDKEDILVPDIFWDYTSGKVLTMEWVEGVKLNEQDAVESQGLSVLDLVNTGIQCS
+LRQLLEYGYFHADPHPGNLLATPDGKLAFLDFGMMSETPEQARSAIIGHVVHMVNR
+>contig_2 218 1 511 ; translated
+XLSKVPIPSNNIYAINDKKSPEDAADDYENRLKELVSEKIIPVSTISGFPKFDLMLLGMG
+PDGHVASLFPSHMQRYEKEKWVTFITDSPKPPPSRITFTFPMINSASEIAMVVTGADLAG
+TTKIALGTTGNVKPGETPLPCTEVSAEGEVTWFLDKDAASQLLNYVRFDD
+>contig_3; 134 1 379  minus strand; translated
+XVDEGVVVAGLSEQEKASVSEILTTARAHSETIENLKRDHSQQVSCIEQHTNDTFRQKYM
+DYEPTGSTPVRSEPDIPSKGTIESLRAMPIDALEEEFRENHSYESAVTGKELMPSVTTRA
+PFSQIN
+>contig_5; -67 1 418  minus strand; translated
+XGGPPQTHVKRDPASRGLFHAVVPALGPLRDARREGRFGRCRVMPGPDIIKEHSVVPTLA
+FDDVLGRLAKYRRRASXGAMNPGDASQVTRGAAGESLLALAPSALVLGEEGPTADVEPDD
+GRFEQVRSGKGXHGKGDTLT
+>contig_7 103 1 296 ; translated
+ENEWSGAEFLNEMAAMMTQNKSNENGTGTFEELQQLFDEMFQSDIESFNGCSSSSNETCS
+NSNKRNSIESSSANFRPENGNESGEISGKKNTRKGKGDX
+>contig_9 34 1 396 ; translated
+XLRLKADEEAQCLNQMQRIIFDEIMEHVELEKGGFYFVYRPGGNGKTLWLAIISKLRSEG
+RIVLAVASSGIALLLVEGGRTAHSRFKIPIDVNEYNNCEIKQNIYLAELICHTNLVIWDE
+APMTQYFVFEAVX
+>contig_10; 78 87 343  minus strand; translated
+MAEENTTTMNLDLNLGPINNSSDDSEPSSRPYTDVAMNLEDWLDSPVRVREVVRHRNHRW
+RSLWRQIPIPPDTRNLALELIGGNAP