Mercurial > repos > greg > assembly_post_processor
comparison assembly_post_processor.xml @ 93:c58892e1a388 draft
Uploaded
author | greg |
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date | Thu, 26 Oct 2017 11:05:42 -0400 |
parents | 55024e4d84d4 |
children | 33915a72ae4e |
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92:55024e4d84d4 | 93:c58892e1a388 |
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24 #if str($target_gene_family_assembly_cond.min_coverage) != '0.0': | 24 #if str($target_gene_family_assembly_cond.min_coverage) != '0.0': |
25 --min_coverage $target_gene_family_assembly_cond.min_coverage | 25 --min_coverage $target_gene_family_assembly_cond.min_coverage |
26 #end if | 26 #end if |
27 #end if | 27 #end if |
28 #if str($options_type.strand_specific) == 'yes': | 28 #if str($options_type.strand_specific) == 'yes': |
29 --strand_specific true | 29 --strand_specific |
30 #end if | 30 #end if |
31 #if str($options_type.dereplicate) == 'yes': | 31 #if str($options_type.dereplicate) == 'yes': |
32 --dereplicate true | 32 --dereplicate |
33 #end if | 33 #end if |
34 --min_length $options_type.min_length | 34 --min_length $options_type.min_length |
35 #end if | 35 #end if |
36 --num_threads \${GALAXY_SLOTS:-4} | 36 --num_threads \${GALAXY_SLOTS:-4} |
37 &>proc.log | 37 &>proc.log |