annotate test-data/transcripts.pep @ 14:b468a86f87d9 draft

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author greg
date Wed, 08 Feb 2017 09:04:01 -0500
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children cc4dba9f6ecd
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1 >contig_1|m.1 contig_1|g.1 type:internal len:115 gc:universal contig_1:344-3(-)
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2 KKLYGDKEDILVPDIFWDYTSGKVLTMEWVEGVKLNEQDAVESQGLSVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPDGKLAFLDFGMMSETPEQARSAIIGHVVHMVN
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3 >contig_2|m.2 contig_2|g.2 type:5prime_partial len:170 gc:universal contig_2:2-511(+)
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4 LSKVPIPSNNIYAINDKKSPEDAADDYENRLKELVSEKIIPVSTISGFPKFDLMLLGMGPDGHVASLFPSHMQRYEKEKWVTFITDSPKPPPSRITFTFPMINSASEIAMVVTGADLAGTTKIALGTTGNVKPGETPLPCTEVSAEGEVTWFLDKDAASQLLNYVRFDD*
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5 >contig_3|m.3 contig_3|g.3 type:5prime_partial len:126 gc:universal contig_3:463-86(-)
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6 VDEGVVVAGLSEQEKASVSEILTTARAHSETIENLKRDHSQQVSCIEQHTNDTFRQKYMDYEPTGSTPVRSEPDIPSKGTIESLRAMPIDALEEEFRENHSYESAVTGKELMPSVTTRAPFSQIN*
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7 >contig_9|m.4 contig_9|g.4 type:internal len:132 gc:universal contig_9:2-394(+)
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8 LRLKADEEAQCLNQMQRIIFDEIMEHVELEKGGFYFVYRPGGNGKTLWLAIISKLRSEGRIVLAVASSGIALLLVEGGRTAHSRFKIPIDVNEYNNCEIKQNIYLAELICHTNLVIWDEAPMTQYFVFEAV
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9 >contig_11|m.5 contig_11|g.5 type:5prime_partial len:108 gc:universal contig_11:2-325(+)
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10 IYGKGIQNMRTLWGGVAPESPVVVVGGGVTPESPVVGGIVLGSPAVLLKSDLLQALPPRLLKSALFQNLPSPLLKSGLLHDIPSELLRISRCCCCSRCCSRNSRCGY*
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11 >contig_11|m.6 contig_11|g.6 type:5prime_partial len:100 gc:universal contig_11:443-144(-)
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12 AAKVTVAPGSRVAAAGSGVASESPATAEAGVAPGSPAVDFNSHSGSFWSNTDCSSNNGRFGATPTGYHGATPTSTVATGDFGTTPTSGAAVGELGVNPT*
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13 >contig_18|m.7 contig_18|g.7 type:internal len:143 gc:universal contig_18:426-1(-)
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14 TEVRRWNKQEDWGRKTWKEAKESTLPKIVGEGIYGVGPILAALSSGRRELYALYVQEGLDLSSNSKKKDKKRFERVLKMVEKIGLSKKEVSKHDLNMVVDNRPHQGLLLDASALEMVSIKELDPVSIDGEKCPLWLALDEVT
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15 >contig_20|m.8 contig_20|g.8 type:internal len:104 gc:universal contig_20:1-309(+)
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16 GLRIDAHGYALQDWQRDLFQLDLVLHDEPSPRTRSILLLPADIVHADACHVDALPHYWIRFAYTVAGHGSRSYPYPCAGHLHWFRHSYPLHVGLVSLDQLLGS
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17 >contig_20|m.9 contig_20|g.9 type:internal len:103 gc:universal contig_20:2-307(+)
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18 AYASMLTDMPYKIGNAICFNLILYFMTNLRREPGAFFFFLLISFTLTLVMSMLFRTIGSVSRTLSQAMAPAAILILALVIYTGFVIPTRYMLGWSRWINYLD
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19 >contig_20|m.10 contig_20|g.10 type:internal len:103 gc:universal contig_20:307-2(-)
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20 IQVVDPTRPAQHVAGRNDETSVNDQRKDKDSCGSHGLRQCTRNGSNSAEEHRHDKRQRERYQQEEEECSWFAAKVRHEVQDQVETDRVANLVGHIREHRCVS
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21 >contig_21|m.11 contig_21|g.11 type:5prime_partial len:168 gc:universal contig_21:519-16(-)
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22 VSIVNQEPVLFSVSIGENIAYGLPDDYVSKVDVIKAAKAANAHEFIIALPQGYDTLVGERGGLLSGGQRQRVAIARALLKNAPILILDEATSALDAVSERLVQDALNRLMKGRTTLVIAHRLSTVQNADQIALCSDGKISELGTHSELLEQKGLYASLVGTQRLAFE*
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23 >contig_24|m.12 contig_24|g.12 type:internal len:111 gc:universal contig_24:331-2(-)
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24 KTRELEIEQILLKSKDLESELESKGSMFIKETEALVAENSKLSQELGAFKSELNDIQMKLNVVSSEKDGTVEELTSARKEIEELTQKLASEGQKLQSQISSIMEENNLLN