comparison DimontPredictorWeb.xml @ 17:2ea4f3401930 draft

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author grau
date Fri, 08 Nov 2013 09:09:58 -0500
parents 3ac569207da6
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16:afa37a53c305 17:2ea4f3401930
1 <tool id="DimontPredictor" name="DimontPredictor" version="0.1" force_history_refresh="true"> 1 <tool id="DimontPredictor" name="DimontPredictor" version="0.1" force_history_refresh="true">
2 <description>DimontPredictor for predicting binding sites using a Dimont model</description> 2 <description>for predicting binding sites using a Dimont model</description>
3 <command>java -Xms256M -Xmx2G -jar \$JAR_PATH/DimontPredictorWeb.jar --run $script_file $summary $summary.id $__new_file_path__ $summary.extra_files_path</command> 3 <command>java -Xms256M -Xmx2G -jar \$JAR_PATH/DimontPredictorWeb.jar --run $script_file $summary $summary.id $__new_file_path__ $summary.extra_files_path</command>
4 <inputs> 4 <inputs>
5 <param type="text" size="40" name="DimontPredictor_jobname" label="Job name" value="" optional="true" help="Please enter a name for your job that should be used in the history (optional)"> 5 <param type="text" size="40" name="DimontPredictor_jobname" label="Job name" value="" optional="true" help="Please enter a name for your job that should be used in the history (optional)">
6 </param> 6 </param>
7 <param type="data" format="xml" name="DimontPredictor_ps_Dimont" label="&lt;hr /&gt;Dimont" help="The trained Dimont classifier, i.e. the &quot;Dimont&quot; output of a previous Dimont run." value="" optional="false"> 7 <param type="data" format="xml" name="DimontPredictor_ps_Dimont" label="&lt;hr /&gt;Dimont" help="The trained Dimont classifier, i.e. the &quot;Dimont&quot; output of a previous Dimont run." value="" optional="false">