Mercurial > repos > ggricourt > data_manager_bigg

diff data_manager_conf.xml @ 0:262b8d79bc08 draft

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"planemo upload for repository https://github.com/brsynth/synbiocad-galaxy-wrappers commit 19ad973add8651c1a18c1bda789e9296a57044b1"
author ggricourt
date Wed, 23 Feb 2022 14:33:49 +0000
parents
children c1d4f14dc768
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Feb 23 14:33:49 2022 +0000
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/bigg_model_sbml_fetcher.xml" id="bigg_model_sbml_fetcher">
+        <data_table name="bigg_model_sbml">
+            <output>
+                <column name="value" />
+                <column name="name" />
+                <column name="path" output_ref="out_file">
+                    <move type="file" relativize_symlinks="True">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">bigg/model/${name}.xml</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/bigg/model/${name}.xml</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>