Mercurial > repos > gga > tripal_tripaille_expression_sync_biomaterials

annotate expression_sync_biomaterials.xml @ 0:89816260c45d draft default tip

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
author gga
date Tue, 27 Nov 2018 12:23:15 -0500
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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1 <?xml version="1.0"?>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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2 <tool id="tripaille_expression_sync_biomaterials" name="Synchronize biomaterials" version="@WRAPPER_VERSION@.0">
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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3 <description>from Chado to Tripal</description>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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4 <macros>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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5 <import>macros.xml</import>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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6 </macros>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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7 <expand macro="requirements"/>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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8 <command detect_errors="aggressive"><![CDATA[
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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9 @AUTH@
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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11 tripaille expression sync_biomaterials
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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13 #if $ids:
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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14 --ids '$ids'
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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15 #end if
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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17 &&
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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19 echo "Data loaded" > $results
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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20 ]]></command>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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21 <inputs>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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22 <!-- arguments -->
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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24 <!-- options -->
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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25 <param name="ids" label="Ids" argument="ids" type="text" help="List of ids of biomaterials to be synced (default: all)" />
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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27 </inputs>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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28 <outputs>
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29 <data format="txt" name="results"/>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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30 </outputs>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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31 <help>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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32 Synchronize some biomaterials
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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34 @HELP@
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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35 </help>
89816260c45d planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit f2d24488fcdce07b02c61451716dfcf0b8900167
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36 </tool>