Mercurial > repos > gga > tripal_expression_delete_biomaterials
annotate expression_delete_biomaterials.xml @ 2:4528f2dcceb7 draft default tip
"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit ea279e5b47cf3d5767328d17b0e40e57b0238ea1"
| author | gga |
|---|---|
| date | Wed, 14 Aug 2019 10:00:16 -0400 |
| parents | f8ab4cdd83aa |
| children |
| rev | line source |
|---|---|
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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1 <?xml version="1.0"?> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
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2 <tool id="expression_delete_biomaterials" name="Delete biomaterials" version="@WRAPPER_VERSION@.0"> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
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3 <description>from Tripal</description> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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4 <macros> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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5 <import>macros.xml</import> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
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6 </macros> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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7 <expand macro="requirements"/> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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8 <code file="tripal.py"/> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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9 <command detect_errors="aggressive"><![CDATA[ |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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10 @AUTH@ |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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11 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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12 tripaille expression delete_biomaterials |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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13 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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14 #if $names: |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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15 --names '$names' |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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16 #end if |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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17 #if $organism_id: |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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18 --organism_id '$organism_id' |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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19 #end if |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
changeset
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20 #if $analysis_id: |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
changeset
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21 --analysis_id '$analysis_id' |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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22 #end if |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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23 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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24 && |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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25 |
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1
f8ab4cdd83aa
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 35c5eff77b573a66f3611b4906417df9a440c857
gga
parents:
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26 echo "Data loaded" > '$results' |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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27 ]]></command> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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28 <inputs> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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29 <!-- arguments --> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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30 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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31 <!-- options --> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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32 <param name="names" label="Names" argument="names" type="text" help="JSON list of biomaterial names to delete." optional="true"> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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33 <expand macro="sanitized"/> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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34 </param> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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35 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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36 <param argument="--organism_id" type="select" dynamic_options="list_organisms()" label="Organism" optional="true" /> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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37 <param argument="--analysis_id" type="select" dynamic_options="list_analyses()" label="Analysis" optional="true" /> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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38 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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39 </inputs> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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40 <outputs> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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41 <data format="txt" name="results"/> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
diff
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42 </outputs> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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43 <help> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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44 Delete some biomaterials |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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45 |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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46 @HELP@ |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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47 </help> |
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5c6159d4f080
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
gga
parents:
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48 </tool> |