# HG changeset patch # User gga # Date 1565790863 14400 # Node ID dff7e67d307349334a7792b8c3f1370f0b8c126c # Parent 069b2039e193663a9e50c345a3a996d13783e54a "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit ea279e5b47cf3d5767328d17b0e40e57b0238ea1" diff -r 069b2039e193 -r dff7e67d3073 expression_add_biomaterial.xml --- a/expression_add_biomaterial.xml Tue Mar 05 05:09:33 2019 -0500 +++ b/expression_add_biomaterial.xml Wed Aug 14 09:54:23 2019 -0400 @@ -1,5 +1,5 @@ - + in Tripal macros.xml @@ -30,6 +30,8 @@ + + diff -r 069b2039e193 -r dff7e67d3073 macros.xml --- a/macros.xml Tue Mar 05 05:09:33 2019 -0500 +++ b/macros.xml Wed Aug 14 09:54:23 2019 -0400 @@ -41,13 +41,15 @@ \$GALAXY_TRIPAL_SHARED_DIR '.auth.yml' && - echo "local:" >> '.auth.yml' && - echo " tripal_url: \"\$GALAXY_TRIPAL_URL\"" >> '.auth.yml' && - echo " username: \"\$GALAXY_TRIPAL_USER\"" >> '.auth.yml' && - echo " password: \"\$GALAXY_TRIPAL_PASSWORD\"" >> '.auth.yml' && + if [ -z "\$TRIPAILLE_GLOBAL_CONFIG_PATH" ]; then + echo "__default: local" > '.auth.yml' && + echo "local:" >> '.auth.yml' && + echo " tripal_url: \"\$GALAXY_TRIPAL_URL\"" >> '.auth.yml' && + echo " username: \"\$GALAXY_TRIPAL_USER\"" >> '.auth.yml' && + echo " password: \"\$GALAXY_TRIPAL_PASSWORD\"" >> '.auth.yml' && - TRIPAILLE_GLOBAL_CONFIG_PATH='.auth.yml' + export TRIPAILLE_GLOBAL_CONFIG_PATH='.auth.yml' + ; fi && ]]> @@ -155,7 +157,7 @@