# HG changeset patch
# User gga
# Date 1551091830 18000
# Node ID c1df80f03ba6aa3e0c1b29c2e772b7caa4fb6af2
# Parent  19d21d9c6656b90a49890ef56a82244501da6c07
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39

diff -r 19d21d9c6656 -r c1df80f03ba6 db_index.xml
--- a/db_index.xml	Tue Nov 27 12:26:19 2018 -0500
+++ b/db_index.xml	Mon Feb 25 05:50:30 2019 -0500
@@ -38,6 +38,11 @@
                 #end for
             #end if
 
+            #if $expose.do_expose == "yes":
+                --exposed
+                --index_url '${expose.index_url}'
+            #end if
+
         &&
 
         echo "Data loaded" > $results
@@ -49,6 +54,8 @@
                    label="Data to index">
                 <option value="website" selected="true">Index all the Tripal content</option>
                 <option value="table">Index a specific table</option>
+                <option value="nodes">Index all website nodes</option>
+                <option value="entities">Index all website entities (Tripal 3 only)</option>
             </param>
             <when value="website"/>
             <when value="table">
@@ -93,6 +100,8 @@
                            help="e.g.: /your/url/[any-column-name]"/>
                 </repeat>
             </when>
+            <when value="nodes"/>
+            <when value="entities"/>
         </conditional>
         <param name="tokenizer"
                type="select"
@@ -110,6 +119,18 @@
             <option value="path_hierarchy">path_hierarchy</option>
         </param>
         <param name="queues" label="Queues" argument="queues" type="integer" value="10" help="Number of indexing task queues" />
+        <conditional name="expose">
+            <param name="do_expose" type="select" label="Expose the index to other websites (read-only)">
+                <option value="yes" selected="true">Yes</option>
+                <option value="no">No</option>
+            </param>
+            <when value="no"/>
+            <when value="yes">
+                <param name="index_url" label="Index Url" argument="--index_url" type="text" help="In order for other sites to link back to your results page, you must specify a path where the form for this index can be reached" />
+            </when>
+            <when value="nodes"/>
+            <when value="entities"/>
+        </conditional>
         <expand macro="wait_for"/>
     </inputs>
     <outputs>
@@ -132,6 +153,19 @@
 
             <expand macro="test_result" />
         </test>
+        <test expect_failure="true" expect_exit_code="1">
+            <conditional name="table">
+                <param name="mode" value="singles" />
+                <param name="table" value="organism" />
+                <param name="fields" value="genus species description" />
+            </conditional>
+            <conditional name="expose">
+                <param name="expose" value="yes" />
+                <param name="index_url" value="http://google.com" />
+            </conditional>
+
+            <expand macro="test_result" />
+        </test>
     </tests>
     <help><![CDATA[
         @HELP_OVERVIEW@
diff -r 19d21d9c6656 -r c1df80f03ba6 macros.xml
--- a/macros.xml	Tue Nov 27 12:26:19 2018 -0500
+++ b/macros.xml	Mon Feb 25 05:50:30 2019 -0500
@@ -2,7 +2,7 @@
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="3.1.1">python-tripal</requirement>
+            <requirement type="package" version="3.2">python-tripal</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -15,7 +15,7 @@
         </stdio>
     </xml>
 
-    <token name="@WRAPPER_VERSION@">3.1.1</token>
+    <token name="@WRAPPER_VERSION@">3.2</token>
 
     <xml name="citation">
         <citations>